SESSION 302: Health data science and artificial intelligence

Track 3
Monday, July 10, 2023
11:00 AM - 12:30 PM
C4.2

Overview

C4.2
Presentations


Speaker

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Dr Michael Costello FAIDH
AIDH Fellow

Session chair

Biography

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Dr Ying Wang
Research Fellow
Australia Institute of Health Innovation

Automating the identification of safety events involving machine learning-enabled medical devices

11:00 AM - 11:10 AM

Presentation

Biography

Dr Ying Wang is a computer scientist and she is passionate about developing advanced ML algorithms to support decision making in health. She leads a project to identify clinical safety events by type and risk levels and responsible for the development of a platform to monitor ML safety events.
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Ben Knoll
Research Programmer
University of Minnesota

Advanced care planning content encoding with natural language processing

11:10 AM - 11:20 AM

Presentation

Biography

Ben Knoll is a Research Programmer at the University of Minnesota where he has been developing natural language processing systems, components, and tools since 2012. His research interests include the creation of tools to assist researchers and the application of machine learning and statistical methods to solve NLP problems.
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Sy Hwang
NLP Data Scientist
University of Pennsylvania

Using natural language processing to extract and classify symptoms among patients with thyroid dysfunction

11:20 AM - 11:30 AM

Biography

Mr Sy Hwang is an MS student specializing in natural language processing (NLP), deep learning, machine learning, and big data processing at the University of Pennsylvania Institute for Biomedical Informatics. He received his BS from Purdue University, MS from University of New Haven, and MS from University of Pennsylvania.
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Dr Danielle Mowery
Chief Research Information Officer | Assistant Professor
University of Pennsylvania

Relation detection to identify stroke assertions from clinical notes using natural language processing

11:30 AM - 11:40 AM

Biography

Dr Danielle Mowery serves as the Penn Medicine Chief Research Information Officer, Assistant Professor of Informatics, as well as Scientific Director of the Clinical Research Informatics Core within the Institute for Biomedical Informatics at the University of Pennsylvania. Her research bridges the gaps between clinical data and actionable healthcare knowledge.
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Dr Thankam Thyvalikakath
Professor & Research Scientist, Director, Dental Informatics
Regenstrief Institute

Rule-based text classification of dental diagnosis

11:40 AM - 11:50 AM

Biography

Dr Thyvalikakath is Professor and Founding Director of Dental Informatics at the Indiana University School of Dentistry (IUSD) and Regenstrief Institute. She is also Associate Dean of the Office of Dental Informatics and Digital Health at IUSD. Dr Thyvalikakath serves as principal/co-Investigator on National Institutes of Health grants. Her research projects include leveraging electronic health record data for clinical research and quality improvement purposes; applying user- centered design and cognitive engineering methods to design clinical systems; implementing clinical decision support systems to promote preventive management; and facilitating health information exchange to enhance care-coordination between medical and dental care providers.
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Prof Keyuan Jiang
Professor
Purdue University Northwest

Answering list-type questions in health domain with pretrained large language model: Case for COVID-19 symptoms

11:50 AM - 12:00 PM

Presentation

Biography

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Lean Franzl Lim Yao
Doctoral Student
Nara Institute of Science & Technology

Extracting spatio-temporal trends in medical research prioritization through natural language processing of case report abstracts

12:00 PM - 12:10 PM

Presentation

Biography

Lean Yao is a doctoral student at the Social Computing Lab of the Nara Institute of Science and Technology. He is currently doing research on NLP mainly using NER and topic modeling tools and is interested in topics relating to rare diseases.
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Dr Hua Xu
Professor
Yale University

Extracting drug-protein relation from literature using ensembles of biomedical transformers

12:10 PM - 12:20 PM

Presentation

Biography

Hua Xu, PhD, FACMI is a Professor at Yale University School of Medicine. He has worked on different clinical NLP topics, including syntactic parsing, word sense disambiguation, and active learning and has built multiple clinical NLP systems including the medication information extraction tool MedEx and a recent comprehensive clinical NLP system CLAMP. Dr Xu served as the Chair of AMIA NLP working group between 2014-2015. He taught NLP tutorials at various conferences such as AMIA, Medinfo, AIME etc.

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